Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shtn1Q8K2Q9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shtn1Q8K2Q9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shtn1Q8K2Q9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Shtn1Q8K2Q9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.86■□□□□ 0.77
Shtn1Q8K2Q9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shtn1Q8K2Q9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Gm1401-201ENSMUST00000122048 772 ntBASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Gm27867-201ENSMUST00000184778 125 ntBASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Rps4l-201ENSMUST00000071745 943 ntBASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shtn1Q8K2Q9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shtn1Q8K2Q9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Gm7862-201ENSMUST00000121461 292 ntBASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.83■□□□□ 0.77
Shtn1Q8K2Q9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shtn1Q8K2Q9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Shtn1Q8K2Q9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shtn1Q8K2Q9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Gm6376-201ENSMUST00000209407 580 ntBASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shtn1Q8K2Q9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shtn1Q8K2Q9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shtn1Q8K2Q9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.8■□□□□ 0.76
Shtn1Q8K2Q9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms