Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Gm27741-201ENSMUST00000185060 237 ntBASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Gm10517-202ENSMUST00000192970 758 ntBASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Gm33142-201ENSMUST00000193913 867 ntBASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps53Q8CCB4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.62■□□□□ 0.73
Vps53Q8CCB4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps53Q8CCB4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.61■□□□□ 0.73
Vps53Q8CCB4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Gm38027-201ENSMUST00000192315 235 ntBASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps53Q8CCB4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vps53Q8CCB4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps53Q8CCB4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vps53Q8CCB4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.58■□□□□ 0.73
Vps53Q8CCB4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps53Q8CCB4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps53Q8CCB4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps53Q8CCB4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms