Protein–RNA interactions for Protein: Q8C5N3

Cwc22, Pre-mRNA-splicing factor CWC22 homolog, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc22Q8C5N3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cwc22Q8C5N3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Gm11336-201ENSMUST00000118168 334 ntBASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 AC122351.1-201ENSMUST00000220467 126 ntBASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Cwc22Q8C5N3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cwc22Q8C5N3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
Cwc22Q8C5N3 Gm11355-201ENSMUST00000121120 306 ntBASIC23.21■■□□□ 1.31
Cwc22Q8C5N3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cwc22Q8C5N3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cwc22Q8C5N3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cwc22Q8C5N3 Gm8839-201ENSMUST00000121279 1645 ntBASIC23.21■■□□□ 1.31
Cwc22Q8C5N3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC23.21■■□□□ 1.31
Cwc22Q8C5N3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Cwc22Q8C5N3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cwc22Q8C5N3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cwc22Q8C5N3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Zfp264-201ENSMUST00000208656 1563 ntBASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Cwc22Q8C5N3 Gfra2-202ENSMUST00000227633 1480 ntBASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Gm6659-201ENSMUST00000174752 547 ntBASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cwc22Q8C5N3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cwc22Q8C5N3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cwc22Q8C5N3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cwc22Q8C5N3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cwc22Q8C5N3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms