Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Eri3Q8C460 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Eri3Q8C460 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Eri3Q8C460 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Eri3Q8C460 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Eri3Q8C460 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Eri3Q8C460 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Eri3Q8C460 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Eri3Q8C460 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Eri3Q8C460 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.04■□□□□ 0.16
Eri3Q8C460 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Eri3Q8C460 Gm7889-201ENSMUST00000185591 958 ntBASIC16.04■□□□□ 0.16
Eri3Q8C460 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.04■□□□□ 0.16
Eri3Q8C460 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Eri3Q8C460 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Eri3Q8C460 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Eri3Q8C460 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Eri3Q8C460 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Eri3Q8C460 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Eri3Q8C460 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Eri3Q8C460 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Eri3Q8C460 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Eri3Q8C460 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Eri3Q8C460 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Eri3Q8C460 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.03■□□□□ 0.16
Eri3Q8C460 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Eri3Q8C460 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Eri3Q8C460 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Eri3Q8C460 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Eri3Q8C460 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Eri3Q8C460 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Eri3Q8C460 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Eri3Q8C460 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Eri3Q8C460 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Eri3Q8C460 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Eri3Q8C460 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Eri3Q8C460 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Eri3Q8C460 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Eri3Q8C460 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Eri3Q8C460 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.02■□□□□ 0.16
Eri3Q8C460 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Eri3Q8C460 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Eri3Q8C460 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Eri3Q8C460 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Eri3Q8C460 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Eri3Q8C460 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Eri3Q8C460 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.02■□□□□ 0.16
Eri3Q8C460 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.02■□□□□ 0.16
Eri3Q8C460 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Eri3Q8C460 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.02■□□□□ 0.16
Eri3Q8C460 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Eri3Q8C460 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Eri3Q8C460 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.02■□□□□ 0.15
Eri3Q8C460 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Eri3Q8C460 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Eri3Q8C460 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Eri3Q8C460 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Eri3Q8C460 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Eri3Q8C460 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Eri3Q8C460 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.01■□□□□ 0.15
Eri3Q8C460 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Eri3Q8C460 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Eri3Q8C460 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Eri3Q8C460 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Eri3Q8C460 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Eri3Q8C460 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Eri3Q8C460 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Eri3Q8C460 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Eri3Q8C460 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.01■□□□□ 0.15
Eri3Q8C460 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.01■□□□□ 0.15
Eri3Q8C460 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Eri3Q8C460 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Eri3Q8C460 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16■□□□□ 0.15
Eri3Q8C460 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Eri3Q8C460 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Eri3Q8C460 Gm16061-201ENSMUST00000122167 857 ntBASIC16■□□□□ 0.15
Eri3Q8C460 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16■□□□□ 0.15
Eri3Q8C460 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16■□□□□ 0.15
Eri3Q8C460 Gm7370-201ENSMUST00000219471 767 ntBASIC16■□□□□ 0.15
Eri3Q8C460 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Eri3Q8C460 Gm8668-201ENSMUST00000120559 1447 ntBASIC16■□□□□ 0.15
Eri3Q8C460 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.99■□□□□ 0.15
Eri3Q8C460 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.99■□□□□ 0.15
Eri3Q8C460 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Eri3Q8C460 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Eri3Q8C460 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Eri3Q8C460 Gm6433-201ENSMUST00000118634 875 ntBASIC15.99■□□□□ 0.15
Eri3Q8C460 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms