Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Usp44Q8C2S0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp44Q8C2S0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp44Q8C2S0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.73■□□□□ 0.75
Usp44Q8C2S0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp44Q8C2S0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Gm21559-201ENSMUST00000220638 855 ntBASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Gm8587-201ENSMUST00000076538 843 ntBASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp44Q8C2S0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Usp44Q8C2S0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Gm22697-201ENSMUST00000175194 63 ntBASIC19.7■□□□□ 0.74
Usp44Q8C2S0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp44Q8C2S0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms