Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ska3Q8C263 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ska3Q8C263 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ska3Q8C263 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ska3Q8C263 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Ska3Q8C263 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ska3Q8C263 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ska3Q8C263 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ska3Q8C263 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ska3Q8C263 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ska3Q8C263 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ska3Q8C263 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Ska3Q8C263 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.85■□□□□ 0.13
Ska3Q8C263 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Gm13474-201ENSMUST00000122466 815 ntBASIC15.85■□□□□ 0.13
Ska3Q8C263 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.85■□□□□ 0.13
Ska3Q8C263 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ska3Q8C263 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.85■□□□□ 0.13
Ska3Q8C263 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ska3Q8C263 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.84■□□□□ 0.13
Ska3Q8C263 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ska3Q8C263 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.84■□□□□ 0.13
Ska3Q8C263 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.84■□□□□ 0.13
Ska3Q8C263 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.84■□□□□ 0.13
Ska3Q8C263 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Ska3Q8C263 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.84■□□□□ 0.13
Ska3Q8C263 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ska3Q8C263 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Ska3Q8C263 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ska3Q8C263 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ska3Q8C263 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ska3Q8C263 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ska3Q8C263 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.83■□□□□ 0.13
Ska3Q8C263 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ska3Q8C263 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ska3Q8C263 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ska3Q8C263 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ska3Q8C263 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ska3Q8C263 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.83■□□□□ 0.12
Ska3Q8C263 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.83■□□□□ 0.12
Ska3Q8C263 Gm18959-201ENSMUST00000208954 655 ntBASIC15.83■□□□□ 0.12
Ska3Q8C263 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ska3Q8C263 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ska3Q8C263 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ska3Q8C263 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ska3Q8C263 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.83■□□□□ 0.12
Ska3Q8C263 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ska3Q8C263 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ska3Q8C263 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ska3Q8C263 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Ska3Q8C263 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ska3Q8C263 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.82■□□□□ 0.12
Ska3Q8C263 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ska3Q8C263 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.82■□□□□ 0.12
Ska3Q8C263 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ska3Q8C263 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ska3Q8C263 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms