Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.78■□□□□ 0.12
Cpne1Q8C166 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cpne1Q8C166 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.77■□□□□ 0.12
Cpne1Q8C166 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.77■□□□□ 0.12
Cpne1Q8C166 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.77■□□□□ 0.12
Cpne1Q8C166 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.77■□□□□ 0.12
Cpne1Q8C166 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cpne1Q8C166 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpne1Q8C166 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.77■□□□□ 0.11
Cpne1Q8C166 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cpne1Q8C166 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Cpne1Q8C166 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cpne1Q8C166 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Cpne1Q8C166 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cpne1Q8C166 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Cpne1Q8C166 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne1Q8C166 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cpne1Q8C166 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne1Q8C166 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne1Q8C166 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne1Q8C166 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne1Q8C166 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne1Q8C166 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne1Q8C166 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.74■□□□□ 0.11
Cpne1Q8C166 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne1Q8C166 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne1Q8C166 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms