Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Phf7-203ENSMUST00000226565 1971 ntBASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nek11Q8C0Q4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nek11Q8C0Q4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Mir7071-201ENSMUST00000184847 69 ntBASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Gm18032-201ENSMUST00000222541 538 ntBASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nek11Q8C0Q4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nek11Q8C0Q4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Gm13216-201ENSMUST00000117145 591 ntBASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nek11Q8C0Q4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nek11Q8C0Q4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nek11Q8C0Q4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nek11Q8C0Q4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nek11Q8C0Q4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nek11Q8C0Q4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nek11Q8C0Q4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nek11Q8C0Q4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nek11Q8C0Q4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nek11Q8C0Q4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nek11Q8C0Q4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms