Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim35Q8C006 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC17.49■□□□□ 0.39
Trim35Q8C006 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim35Q8C006 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim35Q8C006 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.49■□□□□ 0.39
Trim35Q8C006 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim35Q8C006 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Trim35Q8C006 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trim35Q8C006 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim35Q8C006 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim35Q8C006 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim35Q8C006 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim35Q8C006 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim35Q8C006 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim35Q8C006 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim35Q8C006 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim35Q8C006 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim35Q8C006 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.47■□□□□ 0.39
Trim35Q8C006 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim35Q8C006 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Gm17983-201ENSMUST00000190766 594 ntBASIC17.47■□□□□ 0.39
Trim35Q8C006 Gm19253-201ENSMUST00000204279 307 ntBASIC17.47■□□□□ 0.39
Trim35Q8C006 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim35Q8C006 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Trim35Q8C006 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim35Q8C006 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim35Q8C006 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim35Q8C006 Gm44742-201ENSMUST00000207190 1412 ntBASIC17.47■□□□□ 0.39
Trim35Q8C006 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.47■□□□□ 0.39
Trim35Q8C006 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim35Q8C006 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim35Q8C006 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.46■□□□□ 0.39
Trim35Q8C006 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim35Q8C006 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim35Q8C006 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim35Q8C006 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim35Q8C006 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim35Q8C006 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.46■□□□□ 0.39
Trim35Q8C006 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.46■□□□□ 0.39
Trim35Q8C006 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim35Q8C006 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Trim35Q8C006 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim35Q8C006 Gm28941-201ENSMUST00000185536 1017 ntBASIC17.46■□□□□ 0.39
Trim35Q8C006 CT025525.1-201ENSMUST00000226325 1054 ntBASIC17.46■□□□□ 0.39
Trim35Q8C006 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim35Q8C006 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim35Q8C006 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim35Q8C006 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim35Q8C006 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim35Q8C006 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim35Q8C006 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim35Q8C006 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim35Q8C006 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 Mir466f-2-201ENSMUST00000104805 94 ntBASIC17.45■□□□□ 0.38
Trim35Q8C006 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 Gm37684-201ENSMUST00000192779 355 ntBASIC17.45■□□□□ 0.38
Trim35Q8C006 Gm10138-203ENSMUST00000206952 366 ntBASIC17.45■□□□□ 0.38
Trim35Q8C006 Gm10252-201ENSMUST00000209541 832 ntBASIC17.45■□□□□ 0.38
Trim35Q8C006 AC132446.1-201ENSMUST00000222655 226 ntBASIC17.45■□□□□ 0.38
Trim35Q8C006 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.45■□□□□ 0.38
Trim35Q8C006 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim35Q8C006 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim35Q8C006 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim35Q8C006 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim35Q8C006 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim35Q8C006 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim35Q8C006 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.44■□□□□ 0.38
Trim35Q8C006 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms