Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp43Q8BUM9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.05■□□□□ 0.32
Usp43Q8BUM9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp43Q8BUM9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp43Q8BUM9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Gm15565-201ENSMUST00000118890 427 ntBASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Gm16061-201ENSMUST00000122167 857 ntBASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Gm43799-201ENSMUST00000201845 579 ntBASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Haglr-201ENSMUST00000100000 2085 ntBASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp43Q8BUM9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms