Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Gm12085-201ENSMUST00000119263 940 ntBASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Gm3375-201ENSMUST00000203929 796 ntBASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf4Q8BQZ5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Timm23-208ENSMUST00000226683 750 ntBASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cpsf4Q8BQZ5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Odf3b-204ENSMUST00000227834 930 ntBASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cpsf4Q8BQZ5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Gm4974-201ENSMUST00000209974 875 ntBASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4Q8BQZ5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms