Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmbox1Q8BJA3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.46■□□□□ 0.22
Hmbox1Q8BJA3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Hmbox1Q8BJA3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hmbox1Q8BJA3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hmbox1Q8BJA3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmbox1Q8BJA3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Gm18958-201ENSMUST00000174258 762 ntBASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Hmbox1Q8BJA3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.42■□□□□ 0.22
Hmbox1Q8BJA3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms