Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Gm25925-201ENSMUST00000158314 306 ntBASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh3tc2Q80VA5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3tc2Q80VA5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Sh3tc2Q80VA5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Sh3tc2Q80VA5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3tc2Q80VA5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3tc2Q80VA5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sh3tc2Q80VA5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sh3tc2Q80VA5 Gm8969-201ENSMUST00000199694 526 ntBASIC18.33■□□□□ 0.52
Sh3tc2Q80VA5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3tc2Q80VA5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3tc2Q80VA5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3tc2Q80VA5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3tc2Q80VA5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 AW822252-206ENSMUST00000208904 237 ntBASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3tc2Q80VA5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Gm13884-201ENSMUST00000118103 829 ntBASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Mir8098-201ENSMUST00000184011 137 ntBASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3tc2Q80VA5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Gm27459-201ENSMUST00000184860 107 ntBASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3tc2Q80VA5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms