Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.82■□□□□ 0.28
Rpp38Q80UU2 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Gm18115-201ENSMUST00000221209 621 ntBASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Gm10566-201ENSMUST00000086739 996 ntBASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Phf7-203ENSMUST00000226565 1971 ntBASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp38Q80UU2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rpp38Q80UU2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rpp38Q80UU2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpp38Q80UU2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp38Q80UU2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp38Q80UU2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp38Q80UU2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp38Q80UU2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpp38Q80UU2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.78■□□□□ 0.28
Rpp38Q80UU2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.78■□□□□ 0.28
Rpp38Q80UU2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms