Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm2423-201ENSMUST00000074863 733 ntBASIC14.19□□□□□ -0.14
Rif1Q6PR54 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Mir6420-201ENSMUST00000185032 102 ntBASIC14.19□□□□□ -0.14
Rif1Q6PR54 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.18□□□□□ -0.14
Rif1Q6PR54 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.18□□□□□ -0.14
Rif1Q6PR54 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rif1Q6PR54 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Gm7653-201ENSMUST00000214567 508 ntBASIC14.17□□□□□ -0.14
Rif1Q6PR54 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rif1Q6PR54 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.17□□□□□ -0.14
Rif1Q6PR54 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Golph3-205ENSMUST00000228671 2842 ntBASIC14.17□□□□□ -0.14
Rif1Q6PR54 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rif1Q6PR54 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.16□□□□□ -0.14
Rif1Q6PR54 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.16□□□□□ -0.14
Rif1Q6PR54 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.16□□□□□ -0.14
Rif1Q6PR54 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rif1Q6PR54 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rif1Q6PR54 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.15□□□□□ -0.14
Rif1Q6PR54 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rif1Q6PR54 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rif1Q6PR54 Gm44719-201ENSMUST00000206404 149 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms