Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Rps4l-201ENSMUST00000071745 943 ntBASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Gm15165-201ENSMUST00000118140 502 ntBASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup98Q6PFD9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Nup98Q6PFD9 Gm5864-201ENSMUST00000202263 970 ntBASIC19.83■□□□□ 0.77
Nup98Q6PFD9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup98Q6PFD9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.83■□□□□ 0.77
Nup98Q6PFD9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup98Q6PFD9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup98Q6PFD9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 AW822252-206ENSMUST00000208904 237 ntBASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nup98Q6PFD9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.81■□□□□ 0.76
Nup98Q6PFD9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.81■□□□□ 0.76
Nup98Q6PFD9 Mir5126-201ENSMUST00000175513 77 ntBASIC19.81■□□□□ 0.76
Nup98Q6PFD9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.81■□□□□ 0.76
Nup98Q6PFD9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup98Q6PFD9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.81■□□□□ 0.76
Nup98Q6PFD9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup98Q6PFD9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup98Q6PFD9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup98Q6PFD9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup98Q6PFD9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Nup98Q6PFD9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.79■□□□□ 0.76
Nup98Q6PFD9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms