Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hdac4Q6NZM9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Gm7370-201ENSMUST00000219471 767 ntBASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hdac4Q6NZM9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Gm11539-201ENSMUST00000119837 557 ntBASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Gm13436-201ENSMUST00000120418 567 ntBASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.84■□□□□ 0.61
Hdac4Q6NZM9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hdac4Q6NZM9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hdac4Q6NZM9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hdac4Q6NZM9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Hdac4Q6NZM9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Hdac4Q6NZM9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Hdac4Q6NZM9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac4Q6NZM9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.83■□□□□ 0.6
Hdac4Q6NZM9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac4Q6NZM9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.83■□□□□ 0.6
Hdac4Q6NZM9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.83■□□□□ 0.6
Hdac4Q6NZM9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Hdac4Q6NZM9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.83■□□□□ 0.6
Hdac4Q6NZM9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac4Q6NZM9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac4Q6NZM9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hdac4Q6NZM9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac4Q6NZM9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac4Q6NZM9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac4Q6NZM9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac4Q6NZM9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.81■□□□□ 0.6
Hdac4Q6NZM9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac4Q6NZM9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms