Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.29■■□□□ 1
Clcn1Q64347 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.29■■□□□ 1
Clcn1Q64347 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clcn1Q64347 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Clcn1Q64347 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clcn1Q64347 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.29■■□□□ 1
Clcn1Q64347 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clcn1Q64347 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Clcn1Q64347 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn1Q64347 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn1Q64347 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn1Q64347 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn1Q64347 Mir8098-201ENSMUST00000184011 137 ntBASIC21.28■■□□□ 1
Clcn1Q64347 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.28■■□□□ 1
Clcn1Q64347 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn1Q64347 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.28■■□□□ 1
Clcn1Q64347 Gm6443-201ENSMUST00000203599 874 ntBASIC21.28■■□□□ 1
Clcn1Q64347 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn1Q64347 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.28■■□□□ 1
Clcn1Q64347 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.28■■□□□ 1
Clcn1Q64347 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn1Q64347 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn1Q64347 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Clcn1Q64347 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.27■■□□□ 1
Clcn1Q64347 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.27■■□□□ 1
Clcn1Q64347 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Clcn1Q64347 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Clcn1Q64347 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.27■■□□□ 1
Clcn1Q64347 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Gm5421-201ENSMUST00000181698 2354 ntBASIC21.27■■□□□ 1
Clcn1Q64347 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn1Q64347 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Clcn1Q64347 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Clcn1Q64347 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn1Q64347 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn1Q64347 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Clcn1Q64347 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn1Q64347 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.26■□□□□ 0.99
Clcn1Q64347 Gm43514-201ENSMUST00000198852 424 ntBASIC21.26■□□□□ 0.99
Clcn1Q64347 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn1Q64347 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn1Q64347 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn1Q64347 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.25■□□□□ 0.99
Clcn1Q64347 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn1Q64347 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn1Q64347 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn1Q64347 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn1Q64347 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn1Q64347 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.25■□□□□ 0.99
Clcn1Q64347 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Clcn1Q64347 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn1Q64347 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.25■□□□□ 0.99
Clcn1Q64347 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.25■□□□□ 0.99
Clcn1Q64347 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn1Q64347 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.25■□□□□ 0.99
Clcn1Q64347 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn1Q64347 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn1Q64347 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn1Q64347 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn1Q64347 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn1Q64347 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn1Q64347 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Clcn1Q64347 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Clcn1Q64347 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC21.24■□□□□ 0.99
Clcn1Q64347 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn1Q64347 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn1Q64347 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn1Q64347 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn1Q64347 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Clcn1Q64347 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn1Q64347 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.24■□□□□ 0.99
Clcn1Q64347 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clcn1Q64347 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn1Q64347 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn1Q64347 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn1Q64347 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn1Q64347 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Clcn1Q64347 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn1Q64347 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn1Q64347 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.23■□□□□ 0.99
Clcn1Q64347 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn1Q64347 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn1Q64347 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn1Q64347 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.23■□□□□ 0.99
Clcn1Q64347 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Clcn1Q64347 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn1Q64347 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.23■□□□□ 0.99
Clcn1Q64347 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms