Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim27Q62158 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim27Q62158 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim27Q62158 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim27Q62158 Actl10-202ENSMUST00000226583 1501 ntBASIC20.69■□□□□ 0.9
Trim27Q62158 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Trim27Q62158 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.69■□□□□ 0.9
Trim27Q62158 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.69■□□□□ 0.9
Trim27Q62158 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim27Q62158 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.69■□□□□ 0.9
Trim27Q62158 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trim27Q62158 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim27Q62158 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim27Q62158 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim27Q62158 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim27Q62158 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim27Q62158 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim27Q62158 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim27Q62158 Phf7-203ENSMUST00000226565 1971 ntBASIC20.68■□□□□ 0.9
Trim27Q62158 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim27Q62158 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim27Q62158 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim27Q62158 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.68■□□□□ 0.9
Trim27Q62158 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim27Q62158 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim27Q62158 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Trim27Q62158 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim27Q62158 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.67■□□□□ 0.9
Trim27Q62158 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim27Q62158 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.67■□□□□ 0.9
Trim27Q62158 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.67■□□□□ 0.9
Trim27Q62158 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim27Q62158 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim27Q62158 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim27Q62158 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim27Q62158 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.66■□□□□ 0.9
Trim27Q62158 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.66■□□□□ 0.9
Trim27Q62158 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim27Q62158 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim27Q62158 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim27Q62158 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim27Q62158 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim27Q62158 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim27Q62158 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms