Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Notch3Q61982 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Notch3Q61982 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC12.94□□□□□ -0.34
Notch3Q61982 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Notch3Q61982 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Notch3Q61982 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.93□□□□□ -0.34
Notch3Q61982 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.93□□□□□ -0.34
Notch3Q61982 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Notch3Q61982 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.93□□□□□ -0.34
Notch3Q61982 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Notch3Q61982 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Notch3Q61982 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Notch3Q61982 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Notch3Q61982 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Notch3Q61982 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Olfr129-201ENSMUST00000122318 993 ntBASIC12.92□□□□□ -0.34
Notch3Q61982 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.92□□□□□ -0.34
Notch3Q61982 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Notch3Q61982 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.92□□□□□ -0.34
Notch3Q61982 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.92□□□□□ -0.34
Notch3Q61982 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.92□□□□□ -0.34
Notch3Q61982 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.92□□□□□ -0.34
Notch3Q61982 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Notch3Q61982 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.92□□□□□ -0.34
Notch3Q61982 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Notch3Q61982 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.91□□□□□ -0.34
Notch3Q61982 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.91□□□□□ -0.34
Notch3Q61982 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.91□□□□□ -0.34
Notch3Q61982 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.91□□□□□ -0.34
Notch3Q61982 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Notch3Q61982 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.91□□□□□ -0.34
Notch3Q61982 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Notch3Q61982 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Notch3Q61982 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.91□□□□□ -0.34
Notch3Q61982 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Notch3Q61982 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.9□□□□□ -0.34
Notch3Q61982 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Notch3Q61982 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Notch3Q61982 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.9□□□□□ -0.34
Notch3Q61982 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Notch3Q61982 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Notch3Q61982 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.9□□□□□ -0.34
Notch3Q61982 Gm7213-201ENSMUST00000215977 950 ntBASIC12.9□□□□□ -0.34
Notch3Q61982 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.9□□□□□ -0.34
Notch3Q61982 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Notch3Q61982 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Notch3Q61982 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms