Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.01■□□□□ 0.31
Six4Q61321 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.01■□□□□ 0.31
Six4Q61321 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.01■□□□□ 0.31
Six4Q61321 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.01■□□□□ 0.31
Six4Q61321 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Six4Q61321 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Six4Q61321 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Six4Q61321 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Gm13836-201ENSMUST00000121159 501 ntBASIC17■□□□□ 0.31
Six4Q61321 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 AC158538.1-201ENSMUST00000225870 294 ntBASIC17■□□□□ 0.31
Six4Q61321 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Gm36858-201ENSMUST00000194501 2391 ntBASIC17■□□□□ 0.31
Six4Q61321 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Six4Q61321 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six4Q61321 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.99■□□□□ 0.31
Six4Q61321 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Six4Q61321 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.99■□□□□ 0.31
Six4Q61321 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six4Q61321 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six4Q61321 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Gm22697-201ENSMUST00000175194 63 ntBASIC16.99■□□□□ 0.31
Six4Q61321 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.99■□□□□ 0.31
Six4Q61321 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.99■□□□□ 0.31
Six4Q61321 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.99■□□□□ 0.31
Six4Q61321 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six4Q61321 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Six4Q61321 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six4Q61321 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.98■□□□□ 0.31
Six4Q61321 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.98■□□□□ 0.31
Six4Q61321 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Six4Q61321 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Six4Q61321 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.98■□□□□ 0.31
Six4Q61321 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Six4Q61321 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six4Q61321 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms