Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clns1aQ61189 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clns1aQ61189 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.47□□□□□ -0.09
Clns1aQ61189 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clns1aQ61189 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clns1aQ61189 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clns1aQ61189 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.47□□□□□ -0.09
Clns1aQ61189 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clns1aQ61189 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.47□□□□□ -0.09
Clns1aQ61189 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.47□□□□□ -0.09
Clns1aQ61189 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clns1aQ61189 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.47□□□□□ -0.09
Clns1aQ61189 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Clns1aQ61189 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.47□□□□□ -0.09
Clns1aQ61189 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clns1aQ61189 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.47□□□□□ -0.09
Clns1aQ61189 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clns1aQ61189 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clns1aQ61189 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clns1aQ61189 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clns1aQ61189 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Clns1aQ61189 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.46□□□□□ -0.09
Clns1aQ61189 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Clns1aQ61189 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.46□□□□□ -0.09
Clns1aQ61189 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Clns1aQ61189 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clns1aQ61189 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.46□□□□□ -0.09
Clns1aQ61189 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.46□□□□□ -0.09
Clns1aQ61189 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.46□□□□□ -0.1
Clns1aQ61189 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clns1aQ61189 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Clns1aQ61189 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clns1aQ61189 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clns1aQ61189 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clns1aQ61189 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.45□□□□□ -0.1
Clns1aQ61189 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Clns1aQ61189 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.45□□□□□ -0.1
Clns1aQ61189 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Clns1aQ61189 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clns1aQ61189 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clns1aQ61189 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clns1aQ61189 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.44□□□□□ -0.1
Clns1aQ61189 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clns1aQ61189 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.44□□□□□ -0.1
Clns1aQ61189 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.44□□□□□ -0.1
Clns1aQ61189 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clns1aQ61189 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clns1aQ61189 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.43□□□□□ -0.1
Clns1aQ61189 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clns1aQ61189 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clns1aQ61189 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.43□□□□□ -0.1
Clns1aQ61189 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clns1aQ61189 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clns1aQ61189 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms