Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NfkbibQ60778 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NfkbibQ60778 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.26■□□□□ 0.83
NfkbibQ60778 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NfkbibQ60778 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NfkbibQ60778 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.26■□□□□ 0.83
NfkbibQ60778 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.26■□□□□ 0.83
NfkbibQ60778 Gm45328-201ENSMUST00000210942 917 ntBASIC20.26■□□□□ 0.83
NfkbibQ60778 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.26■□□□□ 0.83
NfkbibQ60778 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
NfkbibQ60778 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.26■□□□□ 0.83
NfkbibQ60778 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NfkbibQ60778 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.26■□□□□ 0.83
NfkbibQ60778 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NfkbibQ60778 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NfkbibQ60778 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NfkbibQ60778 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.25■□□□□ 0.83
NfkbibQ60778 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NfkbibQ60778 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NfkbibQ60778 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NfkbibQ60778 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NfkbibQ60778 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NfkbibQ60778 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NfkbibQ60778 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NfkbibQ60778 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NfkbibQ60778 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.24■□□□□ 0.83
NfkbibQ60778 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.24■□□□□ 0.83
NfkbibQ60778 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NfkbibQ60778 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NfkbibQ60778 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NfkbibQ60778 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NfkbibQ60778 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NfkbibQ60778 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.24■□□□□ 0.83
NfkbibQ60778 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NfkbibQ60778 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NfkbibQ60778 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.23■□□□□ 0.83
NfkbibQ60778 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.23■□□□□ 0.83
NfkbibQ60778 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Gm14859-201ENSMUST00000117752 357 ntBASIC20.23■□□□□ 0.83
NfkbibQ60778 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.23■□□□□ 0.83
NfkbibQ60778 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NfkbibQ60778 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NfkbibQ60778 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.22■□□□□ 0.83
NfkbibQ60778 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.22■□□□□ 0.83
NfkbibQ60778 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NfkbibQ60778 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NfkbibQ60778 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NfkbibQ60778 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NfkbibQ60778 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NfkbibQ60778 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NfkbibQ60778 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NfkbibQ60778 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.21■□□□□ 0.83
NfkbibQ60778 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NfkbibQ60778 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.21■□□□□ 0.83
NfkbibQ60778 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NfkbibQ60778 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.21■□□□□ 0.83
NfkbibQ60778 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NfkbibQ60778 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.21■□□□□ 0.83
NfkbibQ60778 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NfkbibQ60778 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.21■□□□□ 0.83
NfkbibQ60778 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NfkbibQ60778 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NfkbibQ60778 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NfkbibQ60778 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NfkbibQ60778 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NfkbibQ60778 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NfkbibQ60778 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NfkbibQ60778 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NfkbibQ60778 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms