Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trp53rkaQ5U452 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trp53rkaQ5U452 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trp53rkaQ5U452 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trp53rkaQ5U452 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.33□□□□□ -0.27
Trp53rkaQ5U452 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Gm43060-201ENSMUST00000200621 289 ntBASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trp53rkaQ5U452 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trp53rkaQ5U452 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trp53rkaQ5U452 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trp53rkaQ5U452 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trp53rkaQ5U452 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trp53rkaQ5U452 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trp53rkaQ5U452 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trp53rkaQ5U452 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms