Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Gm5587-201ENSMUST00000206270 674 ntBASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav2Q5R1I9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Gm14859-201ENSMUST00000117752 357 ntBASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav2Q5R1I9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.46□□□□□ -0.25
Trav2Q5R1I9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav2Q5R1I9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav2Q5R1I9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav2Q5R1I9 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.46□□□□□ -0.26
Trav2Q5R1I9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav2Q5R1I9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav2Q5R1I9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Actl10-202ENSMUST00000226583 1501 ntBASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav2Q5R1I9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms