Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Gm5587-201ENSMUST00000206270 674 ntBASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-4Q5R1I0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-4Q5R1I0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms