Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7d-4Q5R1H9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7d-4Q5R1H9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7d-4Q5R1H9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Trav7d-4Q5R1H9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.9□□□□□ -0.35
Trav7d-4Q5R1H9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Trav7d-4Q5R1H9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav7d-4Q5R1H9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav7d-4Q5R1H9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
Trav7d-4Q5R1H9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav7d-4Q5R1H9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms