Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.71□□□□□ -0.38
Trav3-3Q5R1C3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-3Q5R1C3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Tgds-204ENSMUST00000228543 1594 ntBASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Gm21956-201ENSMUST00000179946 522 ntBASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-3Q5R1C3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav3-3Q5R1C3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms