Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps41Q5KU39 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps41Q5KU39 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.64■□□□□ 0.42
Vps41Q5KU39 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.64■□□□□ 0.41
Vps41Q5KU39 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.64■□□□□ 0.41
Vps41Q5KU39 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps41Q5KU39 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Gm12896-201ENSMUST00000118430 226 ntBASIC17.63■□□□□ 0.41
Vps41Q5KU39 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps41Q5KU39 Dio3-201ENSMUST00000097228 1449 ntBASIC17.63■□□□□ 0.41
Vps41Q5KU39 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.62■□□□□ 0.41
Vps41Q5KU39 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Gm37179-201ENSMUST00000194862 823 ntBASIC17.62■□□□□ 0.41
Vps41Q5KU39 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps41Q5KU39 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.61■□□□□ 0.41
Vps41Q5KU39 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.61■□□□□ 0.41
Vps41Q5KU39 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps41Q5KU39 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.61■□□□□ 0.41
Vps41Q5KU39 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps41Q5KU39 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps41Q5KU39 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Gm11249-201ENSMUST00000117071 859 ntBASIC17.6■□□□□ 0.41
Vps41Q5KU39 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps41Q5KU39 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps41Q5KU39 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms