Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Gm13312-201ENSMUST00000119631 718 ntBASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Gm44450-201ENSMUST00000199528 114 ntBASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 AV026068-213ENSMUST00000223675 1171 ntBASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Vps13aQ5H8C4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Gm5745-201ENSMUST00000183748 313 ntBASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps13aQ5H8C4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Gm8396-201ENSMUST00000057361 823 ntBASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps13aQ5H8C4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps13aQ5H8C4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps13aQ5H8C4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms