Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.69■□□□□ 0.26
Scn2bQ56A07 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2bQ56A07 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Gm12382-201ENSMUST00000122005 922 ntBASIC16.68■□□□□ 0.26
Scn2bQ56A07 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Gm43183-201ENSMUST00000200632 547 ntBASIC16.68■□□□□ 0.26
Scn2bQ56A07 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.68■□□□□ 0.26
Scn2bQ56A07 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2bQ56A07 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.67■□□□□ 0.26
Scn2bQ56A07 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn2bQ56A07 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Gm10517-202ENSMUST00000192970 758 ntBASIC16.67■□□□□ 0.26
Scn2bQ56A07 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2bQ56A07 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.67■□□□□ 0.26
Scn2bQ56A07 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn2bQ56A07 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms