Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ckap2Q3V1H1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Ckap2Q3V1H1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ckap2Q3V1H1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ckap2Q3V1H1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Gm44450-201ENSMUST00000199528 114 ntBASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ckap2Q3V1H1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ckap2Q3V1H1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ckap2Q3V1H1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ckap2Q3V1H1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ckap2Q3V1H1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Ckap2Q3V1H1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ckap2Q3V1H1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Gm26039-201ENSMUST00000158152 144 ntBASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ckap2Q3V1H1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ckap2Q3V1H1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ckap2Q3V1H1 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Gm21559-201ENSMUST00000220638 855 ntBASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Gm8587-201ENSMUST00000076538 843 ntBASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ckap2Q3V1H1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ckap2Q3V1H1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms