Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim80Q3V061 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim80Q3V061 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim80Q3V061 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim80Q3V061 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim80Q3V061 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trim80Q3V061 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Gm18666-201ENSMUST00000190039 958 ntBASIC17.45■□□□□ 0.38
Trim80Q3V061 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim80Q3V061 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.45■□□□□ 0.38
Trim80Q3V061 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim80Q3V061 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim80Q3V061 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim80Q3V061 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.44■□□□□ 0.38
Trim80Q3V061 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim80Q3V061 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim80Q3V061 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Trim80Q3V061 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim80Q3V061 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim80Q3V061 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.43■□□□□ 0.38
Trim80Q3V061 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.43■□□□□ 0.38
Trim80Q3V061 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim80Q3V061 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim80Q3V061 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim80Q3V061 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Trim80Q3V061 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim80Q3V061 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.42■□□□□ 0.38
Trim80Q3V061 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Trim80Q3V061 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim80Q3V061 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim80Q3V061 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim80Q3V061 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.41■□□□□ 0.38
Trim80Q3V061 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim80Q3V061 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim80Q3V061 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms