Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.87■□□□□ 0.13
Trim40Q3UWA4 Gm6365-201ENSMUST00000054711 744 ntBASIC15.87■□□□□ 0.13
Trim40Q3UWA4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim40Q3UWA4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim40Q3UWA4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim40Q3UWA4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim40Q3UWA4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim40Q3UWA4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.86■□□□□ 0.13
Trim40Q3UWA4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Gm13401-201ENSMUST00000117074 291 ntBASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim40Q3UWA4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim40Q3UWA4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim40Q3UWA4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim40Q3UWA4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim40Q3UWA4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.83■□□□□ 0.13
Trim40Q3UWA4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim40Q3UWA4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim40Q3UWA4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trim40Q3UWA4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trim40Q3UWA4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim40Q3UWA4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms