Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm12260-201ENSMUST00000122447 411 ntBASIC20.01■□□□□ 0.79
Col5a2Q3U962 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col5a2Q3U962 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Col5a2Q3U962 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col5a2Q3U962 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col5a2Q3U962 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col5a2Q3U962 Gm14822-201ENSMUST00000122247 291 ntBASIC20■□□□□ 0.79
Col5a2Q3U962 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20■□□□□ 0.79
Col5a2Q3U962 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col5a2Q3U962 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Col5a2Q3U962 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Col5a2Q3U962 Gm27397-201ENSMUST00000184997 107 ntBASIC20■□□□□ 0.79
Col5a2Q3U962 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col5a2Q3U962 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col5a2Q3U962 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col5a2Q3U962 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col5a2Q3U962 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Col5a2Q3U962 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Col5a2Q3U962 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Col5a2Q3U962 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Col5a2Q3U962 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Gm13036-201ENSMUST00000117799 748 ntBASIC19.99■□□□□ 0.79
Col5a2Q3U962 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Gm6550-201ENSMUST00000187574 993 ntBASIC19.99■□□□□ 0.79
Col5a2Q3U962 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col5a2Q3U962 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Col5a2Q3U962 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col5a2Q3U962 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col5a2Q3U962 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col5a2Q3U962 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col5a2Q3U962 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col5a2Q3U962 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col5a2Q3U962 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.97■□□□□ 0.79
Col5a2Q3U962 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Col5a2Q3U962 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col5a2Q3U962 Gm15173-201ENSMUST00000122049 433 ntBASIC19.97■□□□□ 0.79
Col5a2Q3U962 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.97■□□□□ 0.79
Col5a2Q3U962 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col5a2Q3U962 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col5a2Q3U962 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.95■□□□□ 0.78
Col5a2Q3U962 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Gm27628-201ENSMUST00000184911 107 ntBASIC19.95■□□□□ 0.78
Col5a2Q3U962 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Gm15590-201ENSMUST00000078419 552 ntBASIC19.95■□□□□ 0.78
Col5a2Q3U962 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms