Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.71■□□□□ 0.43
Cul4aQ3TCH7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cul4aQ3TCH7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cul4aQ3TCH7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Il3ra-202ENSMUST00000223589 738 ntBASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cul4aQ3TCH7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Cul4aQ3TCH7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.68■□□□□ 0.42
Cul4aQ3TCH7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms