Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tff1Q08423 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tff1Q08423 Gm9987-201ENSMUST00000069768 567 ntBASIC14.04□□□□□ -0.16
Tff1Q08423 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tff1Q08423 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tff1Q08423 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tff1Q08423 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tff1Q08423 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tff1Q08423 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tff1Q08423 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tff1Q08423 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Tff1Q08423 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tff1Q08423 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.04□□□□□ -0.16
Tff1Q08423 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tff1Q08423 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.03□□□□□ -0.16
Tff1Q08423 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tff1Q08423 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.03□□□□□ -0.16
Tff1Q08423 Mir1199-201ENSMUST00000117015 119 ntBASIC14.03□□□□□ -0.16
Tff1Q08423 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.03□□□□□ -0.16
Tff1Q08423 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Tff1Q08423 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tff1Q08423 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.03□□□□□ -0.16
Tff1Q08423 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tff1Q08423 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tff1Q08423 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tff1Q08423 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tff1Q08423 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tff1Q08423 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tff1Q08423 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Tff1Q08423 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tff1Q08423 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.02□□□□□ -0.16
Tff1Q08423 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tff1Q08423 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Tff1Q08423 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tff1Q08423 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tff1Q08423 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tff1Q08423 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.02□□□□□ -0.17
Tff1Q08423 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tff1Q08423 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Tff1Q08423 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Tff1Q08423 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.01□□□□□ -0.17
Tff1Q08423 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tff1Q08423 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tff1Q08423 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Tff1Q08423 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Tff1Q08423 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Tff1Q08423 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.01□□□□□ -0.17
Tff1Q08423 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tff1Q08423 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tff1Q08423 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.01□□□□□ -0.17
Tff1Q08423 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tff1Q08423 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tff1Q08423 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tff1Q08423 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.01□□□□□ -0.17
Tff1Q08423 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tff1Q08423 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tff1Q08423 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Gm20628-201ENSMUST00000177363 3215 ntBASIC14□□□□□ -0.17
Tff1Q08423 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms