Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.54■□□□□ 0.08
Cacna1aP97445 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cacna1aP97445 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.54■□□□□ 0.08
Cacna1aP97445 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cacna1aP97445 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cacna1aP97445 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.53■□□□□ 0.08
Cacna1aP97445 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.53■□□□□ 0.08
Cacna1aP97445 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.53■□□□□ 0.08
Cacna1aP97445 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.53■□□□□ 0.08
Cacna1aP97445 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.53■□□□□ 0.08
Cacna1aP97445 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.53■□□□□ 0.08
Cacna1aP97445 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1aP97445 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1aP97445 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1aP97445 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1aP97445 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1aP97445 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.52■□□□□ 0.08
Cacna1aP97445 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1aP97445 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.52■□□□□ 0.08
Cacna1aP97445 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.52■□□□□ 0.08
Cacna1aP97445 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.52■□□□□ 0.07
Cacna1aP97445 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cacna1aP97445 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cacna1aP97445 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1aP97445 Gm13186-201ENSMUST00000118031 316 ntBASIC15.51■□□□□ 0.07
Cacna1aP97445 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Cacna1aP97445 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1aP97445 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1aP97445 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1aP97445 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.51■□□□□ 0.07
Cacna1aP97445 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Cacna1aP97445 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.51■□□□□ 0.07
Cacna1aP97445 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.51■□□□□ 0.07
Cacna1aP97445 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1aP97445 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cacna1aP97445 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cacna1aP97445 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.51■□□□□ 0.07
Cacna1aP97445 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1aP97445 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1aP97445 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1aP97445 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1aP97445 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.5■□□□□ 0.07
Cacna1aP97445 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Cacna1aP97445 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.5■□□□□ 0.07
Cacna1aP97445 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.5■□□□□ 0.07
Cacna1aP97445 Gm14822-201ENSMUST00000122247 291 ntBASIC15.5■□□□□ 0.07
Cacna1aP97445 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.5■□□□□ 0.07
Cacna1aP97445 Gm10052-201ENSMUST00000168019 960 ntBASIC15.5■□□□□ 0.07
Cacna1aP97445 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.5■□□□□ 0.07
Cacna1aP97445 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Gm7729-201ENSMUST00000050143 801 ntBASIC15.5■□□□□ 0.07
Cacna1aP97445 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cacna1aP97445 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cacna1aP97445 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1aP97445 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Cacna1aP97445 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 Gm27867-201ENSMUST00000184778 125 ntBASIC15.49■□□□□ 0.07
Cacna1aP97445 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.49■□□□□ 0.07
Cacna1aP97445 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.49■□□□□ 0.07
Cacna1aP97445 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cacna1aP97445 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.49■□□□□ 0.07
Cacna1aP97445 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cacna1aP97445 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1aP97445 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.49■□□□□ 0.07
Cacna1aP97445 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms