Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43bP86448 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trim43bP86448 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43bP86448 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trim43bP86448 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim43bP86448 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim43bP86448 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43bP86448 Gm715-201ENSMUST00000117865 831 ntBASIC17.33■□□□□ 0.36
Trim43bP86448 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim43bP86448 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
Trim43bP86448 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim43bP86448 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.33■□□□□ 0.36
Trim43bP86448 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43bP86448 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43bP86448 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim43bP86448 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim43bP86448 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim43bP86448 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43bP86448 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim43bP86448 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim43bP86448 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim43bP86448 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43bP86448 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43bP86448 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.32■□□□□ 0.36
Trim43bP86448 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.32■□□□□ 0.36
Trim43bP86448 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.32■□□□□ 0.36
Trim43bP86448 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43bP86448 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim43bP86448 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43bP86448 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim43bP86448 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43bP86448 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim43bP86448 Mir6982-201ENSMUST00000184354 68 ntBASIC17.32■□□□□ 0.36
Trim43bP86448 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43bP86448 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43bP86448 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Trim43bP86448 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43bP86448 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43bP86448 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim43bP86448 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Trim43bP86448 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim43bP86448 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.31■□□□□ 0.36
Trim43bP86448 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43bP86448 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43bP86448 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43bP86448 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43bP86448 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim43bP86448 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43bP86448 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim43bP86448 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43bP86448 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim43bP86448 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43bP86448 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim43bP86448 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43bP86448 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43bP86448 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43bP86448 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim43bP86448 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim43bP86448 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim43bP86448 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim43bP86448 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trim43bP86448 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim43bP86448 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim43bP86448 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Trim43bP86448 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.3■□□□□ 0.36
Trim43bP86448 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim43bP86448 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim43bP86448 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43bP86448 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim43bP86448 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim43bP86448 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim43bP86448 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Trim43bP86448 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Gm43183-201ENSMUST00000200632 547 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms