Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msx3P70354 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Msx3P70354 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msx3P70354 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msx3P70354 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msx3P70354 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.32■□□□□ 0.36
Msx3P70354 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Msx3P70354 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Msx3P70354 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.32■□□□□ 0.36
Msx3P70354 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.32■□□□□ 0.36
Msx3P70354 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Msx3P70354 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.32■□□□□ 0.36
Msx3P70354 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.32■□□□□ 0.36
Msx3P70354 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.32■□□□□ 0.36
Msx3P70354 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Msx3P70354 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msx3P70354 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Msx3P70354 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Msx3P70354 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msx3P70354 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Msx3P70354 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Msx3P70354 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.3■□□□□ 0.36
Msx3P70354 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.3■□□□□ 0.36
Msx3P70354 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Mir5122-201ENSMUST00000175004 89 ntBASIC17.3■□□□□ 0.36
Msx3P70354 Gm27011-201ENSMUST00000182352 972 ntBASIC17.3■□□□□ 0.36
Msx3P70354 Gm27463-201ENSMUST00000183569 57 ntBASIC17.3■□□□□ 0.36
Msx3P70354 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.3■□□□□ 0.36
Msx3P70354 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.3■□□□□ 0.36
Msx3P70354 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Msx3P70354 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msx3P70354 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msx3P70354 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Msx3P70354 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msx3P70354 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Msx3P70354 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Msx3P70354 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msx3P70354 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Msx3P70354 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.29■□□□□ 0.36
Msx3P70354 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.29■□□□□ 0.36
Msx3P70354 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msx3P70354 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msx3P70354 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msx3P70354 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msx3P70354 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Msx3P70354 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msx3P70354 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msx3P70354 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msx3P70354 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.28■□□□□ 0.36
Msx3P70354 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Msx3P70354 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.28■□□□□ 0.36
Msx3P70354 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.28■□□□□ 0.36
Msx3P70354 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.28■□□□□ 0.36
Msx3P70354 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.28■□□□□ 0.36
Msx3P70354 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msx3P70354 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms