Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rpl39P62892 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Zfp783-201ENSMUST00000095946 670 ntBASIC12.07□□□□□ -0.48
Rpl39P62892 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
Rpl39P62892 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rpl39P62892 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rpl39P62892 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rpl39P62892 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rpl39P62892 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rpl39P62892 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.06□□□□□ -0.48
Rpl39P62892 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.06□□□□□ -0.48
Rpl39P62892 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.06□□□□□ -0.48
Rpl39P62892 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.06□□□□□ -0.48
Rpl39P62892 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rpl39P62892 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rpl39P62892 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.06□□□□□ -0.48
Rpl39P62892 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rpl39P62892 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rpl39P62892 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpl39P62892 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rpl39P62892 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Mir2861-201ENSMUST00000175539 82 ntBASIC12.05□□□□□ -0.48
Rpl39P62892 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.05□□□□□ -0.48
Rpl39P62892 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpl39P62892 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.05□□□□□ -0.48
Rpl39P62892 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl39P62892 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpl39P62892 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rpl39P62892 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpl39P62892 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpl39P62892 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms