Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.27□□□□□ -0.13
Cpne2P59108 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne2P59108 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne2P59108 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne2P59108 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne2P59108 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Cpne2P59108 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne2P59108 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne2P59108 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne2P59108 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpne2P59108 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpne2P59108 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.26□□□□□ -0.13
Cpne2P59108 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpne2P59108 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.26□□□□□ -0.13
Cpne2P59108 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.26□□□□□ -0.13
Cpne2P59108 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.26□□□□□ -0.13
Cpne2P59108 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cpne2P59108 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cpne2P59108 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpne2P59108 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpne2P59108 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cpne2P59108 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Gm27405-201ENSMUST00000184201 112 ntBASIC14.25□□□□□ -0.13
Cpne2P59108 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpne2P59108 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cpne2P59108 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpne2P59108 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne2P59108 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cpne2P59108 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.24□□□□□ -0.13
Cpne2P59108 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cpne2P59108 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cpne2P59108 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.24□□□□□ -0.13
Cpne2P59108 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.24□□□□□ -0.13
Cpne2P59108 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cpne2P59108 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne2P59108 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne2P59108 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne2P59108 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne2P59108 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne2P59108 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.23□□□□□ -0.13
Cpne2P59108 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne2P59108 Idnk-204ENSMUST00000226010 1898 ntBASIC14.23□□□□□ -0.13
Cpne2P59108 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne2P59108 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne2P59108 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms