Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Gm10418-201ENSMUST00000100943 576 ntBASIC19.39■□□□□ 0.69
Tpm2P58774 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Gm6211-202ENSMUST00000167849 925 ntBASIC19.39■□□□□ 0.69
Tpm2P58774 Gm38285-201ENSMUST00000192928 922 ntBASIC19.39■□□□□ 0.69
Tpm2P58774 Gm7291-201ENSMUST00000199147 382 ntBASIC19.39■□□□□ 0.69
Tpm2P58774 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Tpm2P58774 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm2P58774 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tpm2P58774 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.38■□□□□ 0.69
Tpm2P58774 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.38■□□□□ 0.69
Tpm2P58774 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tpm2P58774 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.38■□□□□ 0.69
Tpm2P58774 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.38■□□□□ 0.69
Tpm2P58774 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm2P58774 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Tpm2P58774 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm2P58774 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Tpm2P58774 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.36■□□□□ 0.69
Tpm2P58774 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.36■□□□□ 0.69
Tpm2P58774 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Tpm2P58774 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.36■□□□□ 0.69
Tpm2P58774 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Tpm2P58774 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.36■□□□□ 0.69
Tpm2P58774 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.36■□□□□ 0.69
Tpm2P58774 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.36■□□□□ 0.69
Tpm2P58774 Gm29791-202ENSMUST00000207888 369 ntBASIC19.36■□□□□ 0.69
Tpm2P58774 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.36■□□□□ 0.69
Tpm2P58774 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm2P58774 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.36■□□□□ 0.69
Tpm2P58774 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tpm2P58774 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tpm2P58774 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.35■□□□□ 0.69
Tpm2P58774 Gm42569-201ENSMUST00000200539 472 ntBASIC19.35■□□□□ 0.69
Tpm2P58774 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tpm2P58774 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm2P58774 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm2P58774 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tpm2P58774 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms