Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1P56716 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.13■□□□□ 0.33
Rp1P56716 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.13■□□□□ 0.33
Rp1P56716 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.13■□□□□ 0.33
Rp1P56716 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1P56716 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rp1P56716 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1P56716 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1P56716 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.13■□□□□ 0.33
Rp1P56716 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1P56716 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1P56716 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1P56716 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rp1P56716 Gm13312-201ENSMUST00000119631 718 ntBASIC17.12■□□□□ 0.33
Rp1P56716 Gm18206-201ENSMUST00000207027 926 ntBASIC17.12■□□□□ 0.33
Rp1P56716 Gm6376-201ENSMUST00000209407 580 ntBASIC17.12■□□□□ 0.33
Rp1P56716 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.12■□□□□ 0.33
Rp1P56716 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1P56716 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1P56716 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rp1P56716 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1P56716 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1P56716 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.12■□□□□ 0.33
Rp1P56716 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1P56716 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.12■□□□□ 0.33
Rp1P56716 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1P56716 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rp1P56716 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1P56716 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1P56716 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1P56716 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rp1P56716 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.11■□□□□ 0.33
Rp1P56716 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.11■□□□□ 0.33
Rp1P56716 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.11■□□□□ 0.33
Rp1P56716 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.11■□□□□ 0.33
Rp1P56716 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.11■□□□□ 0.33
Rp1P56716 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1P56716 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rp1P56716 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1P56716 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Rp1P56716 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.1■□□□□ 0.33
Rp1P56716 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.1■□□□□ 0.33
Rp1P56716 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.1■□□□□ 0.33
Rp1P56716 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rp1P56716 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1P56716 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.1■□□□□ 0.33
Rp1P56716 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1P56716 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1P56716 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1P56716 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1P56716 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1P56716 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Rp1P56716 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.09■□□□□ 0.33
Rp1P56716 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rp1P56716 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.09■□□□□ 0.33
Rp1P56716 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rp1P56716 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rp1P56716 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Rp1P56716 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Gm25745-201ENSMUST00000174945 133 ntBASIC17.09■□□□□ 0.33
Rp1P56716 Gm7506-201ENSMUST00000207758 815 ntBASIC17.09■□□□□ 0.33
Rp1P56716 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Gm6296-201ENSMUST00000222599 943 ntBASIC17.09■□□□□ 0.33
Rp1P56716 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rp1P56716 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.09■□□□□ 0.33
Rp1P56716 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rp1P56716 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.09■□□□□ 0.33
Rp1P56716 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1P56716 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rp1P56716 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms