Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Rab4aP56371 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab4aP56371 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab4aP56371 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rab4aP56371 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab4aP56371 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab4aP56371 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab4aP56371 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Rab4aP56371 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rab4aP56371 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rab4aP56371 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab4aP56371 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab4aP56371 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rab4aP56371 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rab4aP56371 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab4aP56371 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab4aP56371 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rab4aP56371 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rab4aP56371 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Rab4aP56371 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.35□□□□□ -0.27
Rab4aP56371 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.35□□□□□ -0.27
Rab4aP56371 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.35□□□□□ -0.27
Rab4aP56371 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.35□□□□□ -0.27
Rab4aP56371 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.35□□□□□ -0.27
Rab4aP56371 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rab4aP56371 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.35□□□□□ -0.27
Rab4aP56371 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab4aP56371 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rab4aP56371 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.34□□□□□ -0.27
Rab4aP56371 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rab4aP56371 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.34□□□□□ -0.27
Rab4aP56371 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rab4aP56371 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.34□□□□□ -0.27
Rab4aP56371 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Rab4aP56371 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab4aP56371 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rab4aP56371 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rab4aP56371 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab4aP56371 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab4aP56371 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Rab4aP56371 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Rab4aP56371 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab4aP56371 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab4aP56371 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab4aP56371 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab4aP56371 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
Rab4aP56371 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab4aP56371 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab4aP56371 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab4aP56371 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab4aP56371 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab4aP56371 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms