Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkn2bP55271 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkn2bP55271 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkn2bP55271 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkn2bP55271 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdkn2bP55271 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkn2bP55271 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Gm18666-201ENSMUST00000190039 958 ntBASIC16.17■□□□□ 0.18
Cdkn2bP55271 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Gm43183-201ENSMUST00000200632 547 ntBASIC16.17■□□□□ 0.18
Cdkn2bP55271 Gm20049-201ENSMUST00000219950 730 ntBASIC16.17■□□□□ 0.18
Cdkn2bP55271 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn2bP55271 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn2bP55271 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.15■□□□□ 0.18
Cdkn2bP55271 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.15■□□□□ 0.18
Cdkn2bP55271 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn2bP55271 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdkn2bP55271 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdkn2bP55271 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdkn2bP55271 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Gm27000-201ENSMUST00000182943 842 ntBASIC16.14■□□□□ 0.17
Cdkn2bP55271 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn2bP55271 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms