Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga2P52927 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga2P52927 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga2P52927 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmga2P52927 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga2P52927 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hmga2P52927 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga2P52927 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.38□□□□□ -0.11
Hmga2P52927 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga2P52927 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga2P52927 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.37□□□□□ -0.11
Hmga2P52927 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.37□□□□□ -0.11
Hmga2P52927 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.37□□□□□ -0.11
Hmga2P52927 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.37□□□□□ -0.11
Hmga2P52927 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga2P52927 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Hmga2P52927 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hmga2P52927 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.36□□□□□ -0.11
Hmga2P52927 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmga2P52927 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmga2P52927 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmga2P52927 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga2P52927 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hmga2P52927 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hmga2P52927 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Hmga2P52927 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Gm10849-201ENSMUST00000100397 618 ntBASIC14.35□□□□□ -0.11
Hmga2P52927 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Hmga2P52927 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Gm5874-201ENSMUST00000096101 508 ntBASIC14.35□□□□□ -0.11
Hmga2P52927 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmga2P52927 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmga2P52927 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hmga2P52927 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hmga2P52927 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmga2P52927 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hmga2P52927 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Hmga2P52927 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmga2P52927 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmga2P52927 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms