Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp6v1aP50516 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6v1aP50516 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6v1aP50516 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.21■□□□□ 0.83
Atp6v1aP50516 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Atp6v1aP50516 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
Atp6v1aP50516 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6v1aP50516 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Atp6v1aP50516 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp6v1aP50516 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.21■□□□□ 0.83
Atp6v1aP50516 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Atp6v1aP50516 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Rprl3-201ENSMUST00000157400 290 ntBASIC20.2■□□□□ 0.82
Atp6v1aP50516 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.2■□□□□ 0.82
Atp6v1aP50516 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6v1aP50516 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.19■□□□□ 0.82
Atp6v1aP50516 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6v1aP50516 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6v1aP50516 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6v1aP50516 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atp6v1aP50516 Gm13312-201ENSMUST00000119631 718 ntBASIC20.19■□□□□ 0.82
Atp6v1aP50516 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.19■□□□□ 0.82
Atp6v1aP50516 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6v1aP50516 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.19■□□□□ 0.82
Atp6v1aP50516 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atp6v1aP50516 Gm6376-201ENSMUST00000209407 580 ntBASIC20.19■□□□□ 0.82
Atp6v1aP50516 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.19■□□□□ 0.82
Atp6v1aP50516 Gm6296-201ENSMUST00000222599 943 ntBASIC20.19■□□□□ 0.82
Atp6v1aP50516 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atp6v1aP50516 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Gm27867-201ENSMUST00000184778 125 ntBASIC20.18■□□□□ 0.82
Atp6v1aP50516 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atp6v1aP50516 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Atp6v1aP50516 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.17■□□□□ 0.82
Atp6v1aP50516 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atp6v1aP50516 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Atp6v1aP50516 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Atp6v1aP50516 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atp6v1aP50516 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atp6v1aP50516 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atp6v1aP50516 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atp6v1aP50516 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.16■□□□□ 0.82
Atp6v1aP50516 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.16■□□□□ 0.82
Atp6v1aP50516 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.16■□□□□ 0.82
Atp6v1aP50516 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atp6v1aP50516 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms