Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp9P49962 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp9P49962 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Srp9P49962 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.37□□□□□ -0.11
Srp9P49962 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Srp9P49962 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Srp9P49962 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.37□□□□□ -0.11
Srp9P49962 Gm10138-203ENSMUST00000206952 366 ntBASIC14.37□□□□□ -0.11
Srp9P49962 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.37□□□□□ -0.11
Srp9P49962 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.37□□□□□ -0.11
Srp9P49962 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp9P49962 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Srp9P49962 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.36□□□□□ -0.11
Srp9P49962 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.36□□□□□ -0.11
Srp9P49962 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.36□□□□□ -0.11
Srp9P49962 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.36□□□□□ -0.11
Srp9P49962 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.36□□□□□ -0.11
Srp9P49962 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 Mtag2-201ENSMUST00000058665 714 ntBASIC14.36□□□□□ -0.11
Srp9P49962 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Srp9P49962 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.36□□□□□ -0.11
Srp9P49962 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp9P49962 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.35□□□□□ -0.11
Srp9P49962 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Srp9P49962 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Srp9P49962 Mir6349-201ENSMUST00000184059 97 ntBASIC14.35□□□□□ -0.11
Srp9P49962 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.35□□□□□ -0.11
Srp9P49962 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.35□□□□□ -0.11
Srp9P49962 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Srp9P49962 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.35□□□□□ -0.11
Srp9P49962 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp9P49962 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp9P49962 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp9P49962 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp9P49962 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Srp9P49962 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp9P49962 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp9P49962 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.34□□□□□ -0.11
Srp9P49962 Gm11249-201ENSMUST00000117071 859 ntBASIC14.34□□□□□ -0.11
Srp9P49962 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Srp9P49962 Gm13158-201ENSMUST00000122007 736 ntBASIC14.34□□□□□ -0.11
Srp9P49962 Mir2861-201ENSMUST00000175539 82 ntBASIC14.34□□□□□ -0.11
Srp9P49962 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.34□□□□□ -0.11
Srp9P49962 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.34□□□□□ -0.11
Srp9P49962 Gm20049-201ENSMUST00000219950 730 ntBASIC14.34□□□□□ -0.11
Srp9P49962 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp9P49962 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms