Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Xcl1P47993 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Xcl1P47993 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC11.06□□□□□ -0.64
Xcl1P47993 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Xcl1P47993 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Xcl1P47993 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Xcl1P47993 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Xcl1P47993 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Xcl1P47993 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Xcl1P47993 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC11.05□□□□□ -0.64
Xcl1P47993 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.05□□□□□ -0.64
Xcl1P47993 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Xcl1P47993 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Xcl1P47993 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Xcl1P47993 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Xcl1P47993 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.04□□□□□ -0.64
Xcl1P47993 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Xcl1P47993 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Xcl1P47993 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Xcl1P47993 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Xcl1P47993 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Gm9870-201ENSMUST00000063874 645 ntBASIC11.04□□□□□ -0.64
Xcl1P47993 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC11.04□□□□□ -0.64
Xcl1P47993 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC11.04□□□□□ -0.64
Xcl1P47993 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.04□□□□□ -0.64
Xcl1P47993 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.04□□□□□ -0.64
Xcl1P47993 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.04□□□□□ -0.64
Xcl1P47993 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.04□□□□□ -0.64
Xcl1P47993 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Xcl1P47993 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.04□□□□□ -0.64
Xcl1P47993 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.04□□□□□ -0.64
Xcl1P47993 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Xcl1P47993 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Xcl1P47993 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Xcl1P47993 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Xcl1P47993 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.04□□□□□ -0.64
Xcl1P47993 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Xcl1P47993 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms